|
Genes that positively correlate with NEP |
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| Gene Probe |
Gene Symbol |
corA* |
corB** |
p-value*** |
Gene Name |
|
|
|||||
| 208469_s_at |
EGFL8 |
0.819 |
0.852 |
0.00006 |
EGF-like-domain, multiple 8 |
| 209826_at |
PPT2 |
0.729 |
0.861 |
0.00008 |
palmitoyl-protein thioesterase 2 |
| 226270_at |
EXOC2 |
0.659 |
0.751 |
0.00006 |
exocyst complex component 2 |
| 201537_s_at |
DUSP3 |
0.632 |
0.79 |
0.00006 |
dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) |
| 223057_s_at |
XPO5 |
0.665 |
0.706 |
0.00018 |
exportin 5 |
| 209238_at |
STX3A |
0.729 |
0.747 |
0.00048 |
syntaxin 3A |
| 200824_at |
GSTP1 |
0.729 |
0.765 |
0.00086 |
glutathione S-transferase pi |
| 208899_x_at |
ATP6V1D |
0.618 |
0.673 |
0.00035 |
ATPase, H+ transporting, lysosomal 34 kDa, V1 subunit D |
| 223113_at |
HSPC196 |
0.718 |
0.765 |
0.00135 |
NA |
| 209490_s_at |
PPT2 |
0.514 |
0.737 |
0.00012 |
palmitoyl-protein thioesterase 2 |
| 200692_s_at |
HSPA9B |
0.557 |
0.667 |
0.00035 |
heat shock 70 kDa protein 9B (mortalin-2) |
| 223056_s_at |
XPO5 |
0.527 |
0.738 |
0.00048 |
exportin 5 |
| 202475_at |
NIFIE14 |
0.514 |
0.781 |
0.00035 |
NA |
| 227124_at |
NA |
0.665 |
0.753 |
0.00147 |
NA |
| 203723_at |
ITPKB |
0.718 |
0.646 |
0.00086 |
inositol 1,4,5-trisphosphate 3-kinase B |
| 200924_s_at |
SLC3A2 |
0.527 |
0.697 |
0.0009 |
solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 |
| 211968_s_at |
HSP90AA1 |
0.43 |
0.831 |
0.00006 |
heat shock protein 90 kDa alpha (cytosolic), class A member 1 |
| 219526_at |
C14orf169 |
0.49 |
0.615 |
0.00035 |
chromosome 14 open reading frame 169 |
| 218465_at |
TMEM33 |
0.729 |
0.697 |
0.00307 |
transmembrane protein 33 |
| 200691_s_at |
HSPA9B |
0.632 |
0.653 |
0.00243 |
heat shock 70 kDa protein 9B (mortalin-2) |
| 212793_at |
DAAM2 |
0.618 |
0.566 |
0.00064 |
dishevelled associated activator of morphogenesis 2 |
| 201089_at |
ATP6V1B2 |
0.618 |
0.601 |
0.0019 |
ATPase, H+ transporting, lysosomal 56/58 kDa, V1 subunit B2 |
| 218305_at |
IPO4 |
0.43 |
0.683 |
0.00035 |
importin 4 |
| 32836_at |
AGPAT1 |
0.618 |
0.56 |
0.00113 |
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) |
| 201195_s_at |
SLC7A5 |
0.43 |
0.642 |
0.00048 |
solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 |
| 202088_at |
SLC39A6 |
0.418 |
0.825 |
0.00064 |
solute carrier family 39 (zinc transporter), member 6 |
| 205512_s_at |
PDCD8 |
0.527 |
0.604 |
0.00307 |
programmed cell death 8 (apoptosis-inducing factor) |
| 1554679_a_at |
LAPTM4B |
0.665 |
0.545 |
0.0019 |
lysosomal associated protein transmembrane 4 beta |
| 226101_at |
PRKCE |
0.514 |
0.542 |
0.00064 |
protein kinase C, epsilon |
| 214359_s_at |
HSP90AB1 |
0.402 |
0.651 |
0.00035 |
heat shock protein 90 kDa alpha (cytosolic), class B member 1 |
| 239406_at |
ZNF193 |
0.49 |
0.642 |
0.00387 |
zinc finger protein 193 |
| 204015_s_at |
DUSP4 |
0.665 |
0.6 |
0.00483 |
dual specificity phosphatase 4 |
| 201771_at |
SCAMP3 |
0.43 |
0.583 |
0.00147 |
secretory carrier membrane protein 3 |
| 203914_x_at |
HPGD |
0.618 |
0.561 |
0.00483 |
hydroxyprostaglandin dehydrogenase 15-(NAD) |
| 211373_s_at |
PSEN2 |
0.43 |
0.542 |
0.0019 |
presenilin 2 (Alzheimer disease 4) |
| 220272_at |
BNC2 |
0.659 |
0.575 |
0.00736 |
basonuclin 2 |
|
*corA = calculated correlation dichotomized based on ratio to lymph node **corB = Pearson correlation ***p-value for w-stat: p-value for Wilcoxan rank-sum test | |||||
Velazquez et al. Journal of Translational Medicine 2007 5:2 doi:10.1186/1479-5876-5-2 |
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