|
Top 70 up-regulated genes |
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| No. |
Gene symbol |
False discovery rate |
Fold difference |
Description |
|
|
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| 1 |
SCAM-1 |
< 1e-07 |
22.68 |
vinexin beta (SH3-containing adaptor molecule-1) |
| 2 |
SNTB1 |
< 1e-07 |
22.04 |
syntrophin, beta 1 (dystrophin-associated protein A1, 59 kDa, basic component 1) |
| 3 |
DMWD |
< 1e-07 |
21.75 |
dystrophia myotonica-containing WD repeat motif |
| 4 |
NPFF |
< 1e-07 |
20.72 |
neuropeptide FF-amide peptide precursor |
| 5 |
FXYD3 |
< 1e-07 |
6.97 |
FXYD domain containing ion transport regulator 3 |
| 6 |
ATP6V0B |
< 1e-07 |
5.77 |
ATPase, H+ transporting, lysosomal 21 kDa, V0 subunit c" |
| 7 |
PPIB |
< 1e-07 |
4.64 |
peptidylprolyl isomerase B (cyclophilin B) |
| 8 |
HIST1H4C |
< 1e-07 |
3.81 |
histone 1, H4c |
| 9 |
PHB |
9.40e-06 |
7.07 |
prohibitin |
| 10 |
NME1 |
9.40e-06 |
5.00 |
non-metastatic cells 1, protein (NM23A) expressed in |
| 11 |
NDUFA9 |
9.40e-06 |
3.34 |
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39 kDa |
| 12 |
BUB1B |
1.20e-05 |
2.77 |
BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast) |
| 13 |
GRK5 |
1.34e-05 |
21.03 |
G protein-coupled receptor kinase 5 |
| 14 |
TPI1 |
1.34e-05 |
10.82 |
triosephosphate isomerase 1 |
| 15 |
CYC1 * |
1.34e-05 |
10.36 |
cytochrome c-1 |
| 16 |
GPC5 |
1.55e-05 |
19.28 |
glypican 5 |
| 17 |
BYSL |
1.67e-05 |
41.59 |
bystin-like |
| 18 |
COX5B |
1.67e-05 |
12.52 |
cytochrome c oxidase subunit Vb |
| 19 |
KATNB1 |
1.84e-05 |
18.37 |
katanin p80 (WD repeat containing) subunit B 1 |
| 20 |
PRKAB2 |
2.03e-05 |
14.24 |
protein kinase, AMP-activated, beta 2 non-catalytic subunit |
| 21 |
PSMB3 |
2.03e-05 |
7.43 |
proteasome (prosome, macropain) subunit, beta type, 3 |
| 22 |
PET112L |
2.16e-05 |
21.46 |
PET112-like (yeast) |
| 23 |
PSMD8 |
2.16e-05 |
4.88 |
proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 |
| 24 |
CSF1 |
2.25e-05 |
20.35 |
colony stimulating factor 1 (macrophage) |
| 25 |
SFTPA2 |
2.25e-05 |
17.66 |
surfactant, pulmonary-associated protein A2 |
| 26 |
PTCD1 |
2.25e-05 |
7.36 |
pentatricopeptide repeat domain 1 |
| 27 |
AARS |
2.25e-05 |
6.65 |
alanyl-tRNA synthetase |
| 28 |
GUK1 |
2.58e-05 |
5.61 |
guanylate kinase 1 |
| 29 |
RPS5 |
2.58e-05 |
4.66 |
ribosomal protein S5 |
| 30 |
MTL5 |
3.3e-05 |
14.60 |
metallothionein-like 5, testis-specific (tesmin) |
| 31 |
MIF * |
3.8e-05 |
10.72 |
macrophage migration inhibitory factor (glycosylation-inhibiting factor) |
| 32 |
POLR2H |
3.94e-05 |
4.68 |
polymerase (RNA) II (DNA directed) polypeptide H |
| 33 |
IFITM2 |
4.38e-05 |
4.17 |
interferon induced transmembrane protein 2 (1–8D) |
| 34 |
MUTYH |
4.41e-05 |
19.61 |
mutY homolog (E. coli) |
| 35 |
ITPKA |
4.41e-05 |
15.19 |
inositol 1,4,5-trisphosphate 3-kinase A |
| 36 |
FDPS |
5.36e-05 |
3.45 |
farnesyl diphosphate synthase |
| 37 |
HIST1H2BG |
6.08e-05 |
10.23 |
histone 1, H2bg |
| 38 |
INPP5D |
6.15e-05 |
17.02 |
inositol polyphosphate-5-phosphatase, 145 kDa |
| 39 |
IDH3G |
6.47e-05 |
47.05 |
isocitrate dehydrogenase 3 (NAD+) gamma |
| 40 |
ERF |
6.49e-05 |
15.57 |
Ets2 repressor factor |
| 41 |
PTPRJ |
6.54e-05 |
13.86 |
protein tyrosine phosphatase, receptor type, J |
| 42 |
ATP5G1 |
7.90e-05 |
4.82 |
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c, isoform 1 |
| 43 |
CDC45L |
8.49e-05 |
22.94 |
CDC45 cell division cycle 45-like (S. cerevisiae) |
| 44 |
ENO1 |
9.67e-05 |
4.75 |
enolase 1, (alpha) |
| 45 |
IDH3B |
0.0001064 |
3.81 |
isocitrate dehydrogenase 3 (NAD+) beta |
| 46 |
ST3GAL4 |
0.0001140 |
28.99 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 4 |
| 47 |
DDR2 |
0.0001152 |
15.87 |
discoidin domain receptor family, member 2 |
| 48 |
IFI30 |
0.0001188 |
3.88 |
interferon, gamma-inducible protein 30 |
| 49 |
EIF4G1 |
0.0001282 |
3.31 |
eukaryotic translation initiation factor 4 gamma, 1 |
| 50 |
CXorf27 |
0.0001372 |
11.62 |
chromosome X open reading frame 27 |
| 51 |
EPB41 |
0.0001423 |
4.05 |
erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) |
| 52 |
RPS15 |
0.0001427 |
6.91 |
ribosomal protein S15 |
| 53 |
ABCA3 |
0.0001432 |
30.18 |
ATP-binding cassette, sub-family A (ABC1), member 3 |
| 54 |
CGA |
0.0001508 |
12.31 |
glycoprotein hormones, alpha polypeptide |
| 55 |
SLC37A4 |
0.0001527 |
23.08 |
solute carrier family 37 (glycerol-6-phosphate transporter), member 4 |
| 56 |
NDUFB8 |
0.0001527 |
3.56 |
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19 kDa |
| 57 |
CSPG4 |
0.0001583 |
60.14 |
chondroitin sulfate proteoglycan 4 (melanoma-associated) |
| 58 |
MTHFD1 |
0.0001583 |
21.57 |
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, |
| 59 |
CYP3A5 |
0.0001586 |
17.90 |
cytochrome P450, family 3, subfamily A, polypeptide 5 |
| 60 |
FKBP4 |
0.0001611 |
6.51 |
FK506 binding protein 4, 59 kDa |
| 61 |
SCO2 |
0.0001760 |
14.31 |
SCO cytochrome oxidase deficient homolog 2 (yeast) |
| 62 |
DPM2 |
0.0001846 |
12.99 |
dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit |
| 63 |
NRGN |
0.0001945 |
16.26 |
neurogranin (protein kinase C substrate, RC3) |
| 64 |
TUBA2 |
0.0001988 |
8.87 |
tubulin, alpha 2 |
| 65 |
GAPD |
0.0001990 |
4.99 |
glyceraldehyde-3-phosphate dehydrogenase |
| 66 |
CDK4 |
0.0002205 |
6.73 |
cyclin-dependent kinase 4 |
| 67 |
BIRC5 |
0.0002380 |
6.62 |
baculoviral IAP repeat-containing 5 (survivin) |
| 68 |
LAMB3 * |
0.0002380 |
5.33 |
laminin, beta 3 |
| 69 |
SSR4 |
0.0002380 |
3.81 |
signal sequence receptor, delta (translocon-associated protein delta) |
| 70 |
PIK4CA |
0.0002398 |
12.01 |
phosphatidylinositol 4-kinase, catalytic, alpha polypeptide |
|
* Genes appeared in table 4 | ||||
Fang et al. Journal of Translational Medicine 2008 6:32 doi:10.1186/1479-5876-6-32 |
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